YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73947466
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSVCCLVLV ALSLWPDRAA APGPPPGPPR ASPDPRAELD SAVLLTRSLL ADTRQLAAQL  60
   61 RDKFPADGDH NLDSLPTLAM SAGALGALQL PGVLTRLRAD LFSYLRHVQW LRRAGGPSLR 120
  121 TLEPELGALQ ARLDRLLRRL QLLMSRLALP QAPPDPPAPP LAPPASAWGG IRAAHAILGG 180
  181 LHLTLDWAVR GLLLLKTRL

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	199	0.96