YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73946759
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRTLLRRRL FSYPTKYYCL LLVFSVVTFS VLRIHQKPEF VSVGHLELVG ENPSSNINCT  60
   61 KVLQGDVDEI QKVQLEILTV KFRQRPRWTT SDYINMTRDC NSFIKRRKYI MEPLSKEEAE 120
  121 FPIAYSIVVH HKIEMLDRLL RAIYMPQNFY CIHVDKKSED SFLAAVLGIA SCFSNIFVAS 180
  181 QLESVVYASW SRVQADLNCM QDLHRMSADW KYLINLCGMD FPIKTNLEIV RKLKSLMGEN 240
  241 NLETERMPSN KKERWKKHFT VVNGKLTNTG TDKMHPPLET PLFSGSAYFV VSRKYVEYVL 300
  301 KNEKIQKFME WAKDTYSPDE YLWATIQRIP EVPGSLSLSQ KYDMSDMHAI ARFVKWQYFE 360
  361 GDVSKGAPYP PCSGVHVRSV CVFGAGDLNW MLRKHHLFAN KFDTDIDLFA IQCLDEHLRH 420
  421 KALETLKH

Type	Start	End	Confidence
Signal Peptide	1	33	0.59
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	428	0.99