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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73946020
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCKGAHAEQ QKARSQLPSQ AAQVACGHAH PDQLAQEPRS QVIKYYHPWG VYILISTCFL  60
   61 LLLLLLLLRD LLLLLLLFLP RNFARAVRNA AAQPGTDAGR RRAAGGGSPV RSRRLPAEPR 120
  121 ARRAMARRPR HSIYSSDEDD EDIEMCDHDY DGLLPKSGKR HLGKTRWTRE EDEKLKKLVE 180
  181 QNGTDDWKVI ANYLPNRTDV QCQHRWQKVL NPELIKGPWT KEEDQRVIEL VQKYGPKRWS 240
  241 VIAKHLKGRI GKQCRERWHN HLNPEVKKTS WTEEEDRIIY QAHKRLGNRW AEIAKLLPGR 300
  301 TDNAIKNHWN STMRRKVEQE GYLQESSKAS PPAVATSFQK NSHLMGFAHA PPSAHLPPAG 360
  361 QPSVNNDYSY YHISEAQNVS SHVPYPVALH VNIVNVPQPA AAAIQRHYND EDPEKEKRIK 420
  421 ELELLLMSTE NELKGQQASP SQNHTCSYPG WHSTTIADHT RPHGDSAPVS CLEEHHSTPS 480
  481 LPVDPGSLPE ESASPARCMI VHQGTILDNV KNLLEFAETL QFIDSDSSSW CDLSSFEFCE 540
  541 EADFSPSQHH AGKALQLLQR EGSVNRAAGE PSTRVNKLKL REGSLDLLKP LPPSRHSTFP 600
  601 LVILRKKRGQ ASPLATGDSS SFVFADVSSS TPKRSPVKSL PFSPSQFLNT SGNHENLDLE 660
  661 MASLTSTPLN GHKLTVTTPF HRDQTVKTQK ENTIFRTPAI KRSILESSPR TPTPFKHALA 720
  721 AQEIKYGPLK MLPQTPSHLV EDLQDVIKQE SDEPGIVAEF QENGPPLLKK IKQEVESPTD 780
  781 KAGNFFCSNH WEGESLNTQL FTQASPVADV PNILTSSVLM TPVSEDEDNV LKAFTVPKNR 840
  841 SLASPLQPCG GAWEAASCGK MEDQMTASGQ ARKYVNAFST RTLVM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle