YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73945996
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCKGNSTAFF ISNPSKCCEN KRSPPKAPKR SVCLYGMVIT EETPAATNME TLYRVPFLVL  60
   61 ECPNLKLKRP PWVHMPSAMT VYALVVVSYF LITGGIIYDV IVEPPSVGSM TDEHGHQRPV 120
  121 AFLAYRVNGQ YIMEGLASSF LFTMGGLGFI ILDRSNAPNI PKLNRFLLLF IGFVCVLLSF 180
  181 FMARVFMRMK LPGYLMG

Type	Start	End	Confidence
Cytoplasmic	1	77	0.98
Transmembrane Helix	78	101	0.87
Non-Cytoplasmic	102	130	0.97
Transmembrane Helix	131	152	0.92
Cytoplasmic	153	165	0.85
Transmembrane Helix	166	187	0.93
Non-Cytoplasmic	188	197	0.97