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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73945890
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQENEEAGCH GTNQLKSPET VFVELRTLLG CKTFSAKSRK IPGKTGVANS STFTLDMLLF  60
   61 FILGLLVHFV FFGSIFDIYF TSPLVHGMTP QLTPLPPPAK RLVLFVADGL RADTLYELDE 120
  121 NGNTRAPFIR NIIMHEGSWG ISHTRVPTES RPGHVALIAG FYEDVSAVAK GWKENPVGFD 180
  181 SLINESRYTW SWGSPDILTM FAKGASGDHV YAYSYDADNE DFGAQDVTKL DTWVFDNMKE 240
  241 FFHAARNNQS LFSKLNEEKI VFFLHLLGID TNGHAHRPTS REYKDNIKVV DEGMKEIVSM 300
  301 LEDFYGNDGK TAFIFTSDHG MTDWGFHGAG HPSETLTPFV TWGAGIKYPQ RVSAQKFDDA 360
  361 FLKEWKLENW KRQDIHQADI APLMASLIGV PFPLNSVGIL PVDYLNNTDL FKAESMFTNA 420
  421 VQILEQFKVK MTQKKEAILP FFFTPFKLLS ESKQLNILRK ARSYIKQRKY DEAVSLCKEL 480
  481 IQLALKGLSY YHTYDRFFLG INVVLGFVGW TSYASLLIIR SHSSFTRGVS KEVKKPSHLL 540
  541 SCSFIAVGVL VAFFLLIQDC PWTYYIYCLL PVPIWYAVLR EFQVIQDFVI SLLTFPPSQL 600
  601 AGYLFIFTLG IEVLVLSFFY RYMLTAGLIA FACWPFITQL WIRAKSISLS WIFFSLLLAV 660
  661 FPLMPVVGRK PDIFLVIGAG SLVLLLSLCV LTSLIKRKDR FINEELLLHL FQMLSIALSM 720
  721 YVVYSTHHSL LKKQGLPFLN QIISWIILAS SFVLPLLSPT SLFERLFSIL LSWMSAYLLL 780
  781 STGYEALFPL VLSCLMFVWI QMEQETRQQS GVSYRQKVTS LQFTCNLDIT QFRHLYLDDI 840
  841 RRAFFLVFFL VTAFFGTGNI ASVNSFDLAS VYCFLTVFSP YMMGALMMWK ILIPFVLVMC 900
  901 AFEAVQLTTQ LSSKSLFLMV LIISDIMALH FFFLVKDYGS WLEIGTSISH YVIVMSMTIV 960
  961 LMLLNGLAHL LTTKKLELYG KSKSHLI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle