YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73945781
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREAAAAAEL VPPPAFAVTP AAAAMEEPPP PPPGPEPEPE PEPEPERCRA ARQECTVGDS  60
   61 ACKNSESDPE DFSDEINTEN LYGTSPPSTP RQMKRMSTKH QRNNVGKPAN RSGLKEKMNA 120
  121 PNQPPHKDTG KTMENVEEYS YKQEKKIRAA LRTTERDHKK NVQCSFMLDS VGGSLPKKSI 180
  181 PDVDLNKPYL SLGCSNAKLP VSVPMPIPRT ARQTSRTDCP ADRLKFFETL RLLLKLTSVS 240
  241 KKKDRETGET KNTSAFWFNR SNELIWLELQ AWHAGRTIND QDLFLYTARQ AIPDIINEIL 300
  301 TFKVNYGSFA FVRNGASFNG TSVEGQCRAP HGTKIVCYST YHEHLQRQRV SFEQVKRIME 360
  361 LLEYMEALYP SLQALQKDYE KYAAKDFQDR VQALCLWLNI TKDLNQKLRI MGTVLGIKNL 420
  421 SDIGWPVFEI PSPRSSKGNE PEDEGDDTEG DLKELDSSTD ESEEEQLSGP RAPEPTQPID 480
  481 TNFSIHSQDC VLKKLERLES EDDSFGWGAP DCSTEAGFSR HCLTSIYRPF VDKALKQMGL 540
  541 RKLILRLHKL MDGSLQRARI ALVKSDHPVE FSEFPDPMWG SDYVQLSRTP PSSEQKGSTV 600
  601 SWDELKSMDL PSFEPAFLVL CRVLLNVIHE CLKLRLEQRP AGEPSLLSIK QLVRECKEVL 660
  661 KGGLLMKQYY QFMLHEVLAD LQKTDCNIDA FEEDLHKMLM VYFDYMRSWI QMLQQLPQAS 720
  721 HSLKNLLEEE WNFTKEITHY IRGGEAQAGK LFCDIAGMLL KSTGSFLEFG LQESCAEFWT 780
  781 SADDSNASDE IRRSVIEISR ALKELFHEAR ERASKALGFA KMLRKDLEIA AEFILSAPIR 840
  841 DLLDVLKSKQ YVKVQIPGLE NLQVFVPDTL AEEKNIILQL LNAAAGKDCS KESDDVLIDA 900
  901 YLLLTKQSDR ARDSEDSWAS WEVRPVKIVP QVETVDTLRS MQVDNLLLVV MQSAHLTIQR 960
  961 KAFQQSIEGL MTLRQEQTSS QPVIARALQQ LKNDALELCN RISDAIDRVD HMFTSEFDAE1020
 1021 VDESESVTLQ QYYREAMIQG YNFGFEYHKE VVRLMSGEFR QKIGDKYISF ARKWMNYVLT1080
 1081 KCESGRGTRP RWATQGFDFL QAIEPAFISA LPEDDFLSLQ ALMNECIGHV IGKPHSPVTA1140
 1141 IHRNSPRPVK VPRCHSDPPN PHLIIPTPEG FRGSSVPEND RLASIAAELQ FRSLSRHSSP1200
 1201 TEERDEPAYP KGDSSGSARR SWELRTLISQ TKDSASKQGP IEAIQKSVRL FEEKRYREMR1260
 1261 RKNIIGQVCD TPKSYDNVMH VGLRKVTFKW QRGNKIGEGQ YGKVYTCISV DTGELMAMKE1320
 1321 IRFQPNDHKT IKETADELKI FEGIKHPNLV RYFGVELHRE EMYIFMEYCD EGTLEEVSRL1380
 1381 GLQEHVIRLY SKQITIAINV LHEHGIVHRD IKGANIFLTS SGLIKLGDFG CSVKLKNNAQ1440
 1441 TMPGEVNSTL GTAAYMAPEV ITRAKGEGHG RAADIWSLGC VVIEMVTGKR PWHEYEHNFQ1500
 1501 IMYKVGMGHK PPIPERLSPE GKDFLSHCLE SEPRMRWTAS QLLDHSFVKV CTDEE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle