YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73945390
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MICTFLRAAR CAEKLCRSSG KPLFPPHFVL NRARLKTASG LSWGLREQKK AVRPESILGV  60
   61 TQKTIWTQRQ SPQRAGDDGS KQVSVHSQRG EPVVSTSQKV KEAGRDFTYL IVVLIGITVT 120
  121 GGLFYTIFKE LFSSSSPNKI YGKALEKCRS HPEVISIFGE PVKGYGEATR RGRRQHVSFI 180
  181 EYVKDGLKHM RVKFYIEGSE PGKQGTVHLE VKENPESGEY EFRYIFVELE PHPRRTIIIE 240
  241 DNRS

Type	Start	End	Confidence
Cytoplasmic	1	106	0.98
Transmembrane Helix	107	128	0.94
Non-Cytoplasmic	129	244	0.99