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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73945339
Protein type: Transmembrane
Type Confidence: 0.58
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERGGQAGLG SREGPAGNGP DPGCARAAAA PGDGQAAAAL LAPMDLGEEP LEKAARARPA  60
   61 KDPNTYKVLS LVLSVCVLTT ILGCIFGLKP SCAKEVKSCK GRCFERTFGN CRCDVACVDL 120
  121 GNCCLDYQET CIEPERIWTC SKFRCGEKRL SRSLCSCSDD CRDKGDCCVN YSSVCLGEKS 180
  181 WVEETCESID EPQCPAGFEM PPTLLFSLDG FRAEYLHTWG GLLPVISKLK NCGTYTKNMR 240
  241 PVYPTKTFPN HYSIVTGLYP ESHGIIDNKI YDPKMNAFFA LKSKEKFNPE WYKGEPIWLT 300
  301 TKYQGLKSGT FFWPGSDVEI KGILPDIYKM YNGSIPFEER ILAVLKWLQL PKDERPHFYT 360
  361 LYLEEPDSSG HSYGPVSSEV IRALQRVDNM VGMLMDGLKG LNLHRCLNLI LISDHGMEQG 420
  421 SCKKYVYLNK YLGDVKDIKI VYGPAARLRP SDVPNKYFSF NYEDLAKNLS CREPNQHFKP 480
  481 YLKHFLPKRM HFAKNDRIEP LTFYLDPQWQ LALNPSERKH CGSGFHGSDN LFSNMQALFI 540
  541 GYGPGFKHNI EVDSFENIEV YNLMCDLLNL TPAPNNGTHG SLNHLLKNPV YTPKNPKEVH 600
  601 PMVQCPFTRA PRHNLDCSCD PSVLPVTDFE TQLNLTVAEE KVIKRGTLPY GRPRVIQKNT 660
  661 TVCLLYQHQF VSGYSHDILM PLWTSYTVDR NDSFSTEDFS NCLYQDLRIP LSPIHKCSFY 720
  721 KNNAELSYGF LYPPQLNKGS NQLYSEALLS TNIVPMYQSF QVIWHYFHGT LLQRYVEERN 780
  781 GVNVVSGPVF DSDYDGRYDS SETLRQNSRL IHNQEILIPT HFFIVLTNCK DTFQTPSQCD 840
  841 DLDSLAFILP HRADNSESCV HGKHESLWVE ELLRLHRARI TDVEHLTGLS FYQERRESIS 900
  901 DILKLKTQLP AFDQED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle