YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73909149
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VCSRHPVRVK GLEGSEMESA RENIDLQPGS SDPRSQPINL NHYATKKSVA ESMLDVALFM  60
   61 SNAMRLKAVL EQGPSSHYYT TLVTLISLSL LLQVVIGVLL VVIARLNLNE VEKQWRLNQL 120
  121 NNAATILVFF TVVINVFITA FGAHKTGFLA ARASRNPL

Type	Start	End	Confidence
Cytoplasmic	1	80	0.63
Transmembrane Helix	81	104	0.89
Non-Cytoplasmic	105	122	0.54
Transmembrane Helix	123	144	0.91
Cytoplasmic	145	158	0.53