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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|69111702
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAFKGVWTQ AFWKAVTAEF LAMLIFVLLS VGSTINWGGS ENPLPVDMVL ISLCFGLSIA  60
   61 TMVQCFGHIS GGHINPAVTV AMVCTRKISI AKSVFYITAQ CLGAIIGAGI LYLVTPPSVV 120
  121 GGLGVTTVHG NLTAGHGLLV ELIITFQLVF TIFASCDSKR TDVTGSVALA IGFSVAIGHL 180
  181 FAINYTGASM NPARSFGPAV IMGNWENHWI YWVGPIIGAV LAGALYEYVF CPDVELKRRL 240
  241 KEAFSKAAQQ TKGSYMEVED NRSQVETEDL ILKPGVVHVI DIDRGDEKKG KDSSGEVMED 300
  301 AKNIKKGPAP FYPLEDGTAG EQLHKAMKRY ALVPGTIAFT DAHIEVDITY AEYFEMSVRL 360
  361 AEAMKRYGLN TNHRIVVCSE NSLQFFMPVL GALFIGVAVA PANDIYNERE LLNSMGISQP 420
  421 TVVFVSKKGL QKILNVQKKL PIIQKIIIMD SKTDYQGFQS MYTFVTSHLP PGFNEYDFVP 480
  481 ESFDRDKTIA LIMNSSGSTG LPKGVALPHR TACVRFSHAR DPIFGNQIIP DTAILSVVPF 540
  541 HHGFGMFTTL GYLICGFRVV LMYRFEEELF LRSLQDYKIQ SALLVPTLFS FFAKSTLIDK 600
  601 YDLSNLHEIA SGGAPLSKEV GEAVAKRFHL PGIRQGYGLT ETTSAILITP EGDDKPGAVG 660
  661 KVVPFFEAKV VDLDTGKTLG VNQRGELCVR GPMIMSGYVN NPEATNALID KDGWLHSGDI 720
  721 AYWDEDEHFF IVDRLKSLIK YKGYQVAPAE LESILLQHPN IFDAGVAGLP DDDAGELPAA 780
  781 VVVLEHGKTM TEKEIVDYVA SQVTTAKKLR GGVVFVDEVP KGLTGKLDAR KIREILIKAK 840
  841 KGGKIAV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle