YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|69111664
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAFKGVWTQ AFWKAVSAEF LATLIFVLLG VGSTINWGGS ENPLPVDMVL ISLCFGLSIA  60
   61 TMVQCFGHIS GGHINPAVTV AMVCTRKISI AKSVFYIIAQ CLGAIIGAGI LYLVTPPSVV 120
  121 GGLGVTTVHG NLTAGHGLLV ELIITFQLVF TIFASCDSKR TDVTGSIALA IGFSVAIGHL 180
  181 FAINYTGASM NPARSFGPAV IMGNWANHWI YWVGPIMGAV LAGALYEYVF CPDVELKRRL 240
  241 KEAFSKAAQQ TKGSYMEVED NRSQVETEDL ILKPGVVHVI DIDRGEEKKG KDSSGEVLSS 300
  301 VLMEDAKNIK KGPAPFYPLE DGTAGEQLHK AMKRYALVPG TIAFTDAHIE VDITYAEYFE 360
  361 MSVRLAEAMK RYGLNTNHRI VVCSENSLQF FMPVLGALFI GVAVAPANDI YNERELLNSM 420
  421 GISQPTVVFV SKKGLQKILN VQKKLPIIQK IIIMDSKTDY QGFQSMYTFV TSHLPPGFNE 480
  481 YDFVPESFDR DKTIALIMNS SGSTGLPKGV ALPHRTACVR FSHARDPIFG NQIIPDTAIL 540
  541 SVVPFHHGFG MFTTLGYLIC GFRVVLMYRF EEELFLRSLQ DYKIQSALLV PTLFSFFAKS 600
  601 TLIDKYDLSN LHEIASGGAP LSKEVGEAVA KRFHLPGIRQ GYGLTETTSA ILITPEGDDK 660
  661 PGAVGKVVPF FEAKVVDLDT GKTLGVNQRG ELCVRGPMIM SGYVNNPEAT NALIDKDGWL 720
  721 HSGDIAYWDE DEHFFIVDRL KSLIKYKGYQ VAPAELESIL LQHPNIFDAG VAGLPDDDAG 780
  781 ELPAAVVVLE HGKTMTEKEI VDYVASQVTT AKKLRGGVVF VDEVPKGLTG KLDARKIREI 840
  841 LIKAKKGGKI AV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle