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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73745877, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMKLLLLSA LLGFVFHVGA KTDSNPCISA NAKTCGECIQ IGPQCVWCKD PDFKPSRCDD  60
   61 IESMAKAGCT ADGVENPRGA VTIDKNKPVT NRKTDGGQNL RPDEITQIQP QKVTLNLRSG 120
  121 EAQKFTLKFK RAEDYPIDLY FLMDLSHSMV SNLENVKKLG TELANEMKDI TKDLHIGFGS 180
  181 FLEKLVMPYI LMTPKYLKNP CFPSDCTAPF SYKNVLSLTD NHGLFTQEVS KQKTSGNLDA 240
  241 PEAGFDAIMQ AAVCTDVIGW RNVTRLLVFS TDAGFHLAGD GKLGGIVRPN DGKCHLDNNM 300
  301 YTMSNYFDYP TISQLVDTLS GNNIQTIFAV TEEIREIYQE LSALIPKSAV GILSTSSSNV 360
  361 IKLIIDAYNS LSSEVILENS KLPDGVSISY VSHCKNGVSG TGDNGRKCSN ISIGDEVLFD 420
  421 IEITAKGCPS KGKPETIKIK PLGFSEEVEI LLNYICECEC HKDGIKNSPK CSGGQGTLEC 480
  481 GVCRCNEGRL GRLCECSHDE VLADDLDAYC RMNNGTEVCS NNGECVCGTC ECKKRDNPEE 540
  541 RYSGKFCECD NFSCDRSNNK LCGGHGRCEC KKCICDANYT GSACDCPLDT ATCLASTNEI 600
  601 CNGRGKCECG VCKCDENYEG PTCEICPTCP RICTERKDCV ECRHFGTGSK QKTCEEDCKS 660
  661 YSIKKVKTKE DLPPPNINHC KERDVDDCWI FFTSSIEKDG SIQVYVAENR ECPSGPDIIP 720
  721 IVAGVVAGIV LIGLALLLIW KLLMVIHDRR EFDKFEKEKN NAKWDTGENP IYKSAVTTVV 780
  781 NPRYEGK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle