YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74209553
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGWCEAIAR NPHRIPNTTR TPETSGDVAD ASQTSTLNEK SPGRSASRSS NISKASSPTT  60
   61 GTAPRSQSRL SVCPSTQDIC RICHCEGDEE SPLITPCRCT GTLRFVHQSC LHQWIKSSDT 120
  121 RCCELCKYDF IMETKLKPLR KWEKLQMTTS ERRKIFCSVT FHVIAVTCVV WSLYVLIDRT 180
  181 AEEIKQGVLE WPFWTKLVVV AIGFTGGLVF MYVQCKVYVQ LWRRLKAYNR VIFVQNCPDT 240
  241 ANKLEKNFPC NVNTEIKDAV VVPVPQTGSN TLPTAEGAPP EVIPV

Type	Start	End	Confidence
Cytoplasmic	1	154	0.98
Transmembrane Helix	155	177	0.91
Non-Cytoplasmic	178	192	0.95
Transmembrane Helix	193	215	0.89
Cytoplasmic	216	285	0.96