YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66803723
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLKTVFLSA LRSITMPAVP LQTSRIHTSA CWRKAEDRKE MLASLPAKDE GTVGEKTVDI  60
   61 DTLINRKAKF FPDASTATTL FNGTPFNELP ICNIRVSPNN TIISVTDHKE VLRLIRSCGI 120
  121 EGFKNTRKGT NIAAQATAVT ISGKAIELGW KTVRVKVRGL GPGRMSAIKG LQMGGLNIVS 180
  181 ITDNTHVSFN PPRPRKQRSL

Type	Start	End	Confidence
Signal Peptide	1	20	0.80
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	200	0.98