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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49333549, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSANSNEGPG LDGKWFEEEE EKNGMFGSAG PHFDEMRDDL RAPKQQFHPF EGTGVAMETA  60
   61 STGDSLSDMF MKSSPVEGDL YTSLLSSKSS SNPFNDGASL FSSEGNRSPP APTGTDSGIG 120
  121 MTPGDPSDHQ TTLQGSHKSD HYSYMDMGGD LCDFGSMGNA KNKQQPPMSG YGDEEDEEDD 180
  181 DEDEDDIQDF KPKIEERGSK ESSHDPFDLG RYLEKSPLGS EDTEVKTSTG SAGGQHAFPY 240
  241 VEDPSDEEMA DFRSYRRMET PQSASPVKIT VTTESHSTAS EPVRVSPQGG MSERDSVLSF 300
  301 GQQGLPTVTL SEPEDDSAAS SANHSPNHSP TGRESPSDVL FHPAGMKSMS STQDSSSISS 360
  361 HPNPPPIHDI KTSAKPSSPW AQDLQGSGDE SGDSEIEQVA EELDSPLHDL TSKTPPAKGG 420
  421 FSPTSNPFEP PSYTSATDKA SNPFDKPQTN KVSASNPFDL SAGSKMGFGQ SSNPPLYSLL 480
  481 REEREAELDS DLLIESASEE SPKREQEYSA PKPPEPSSPL ITDNMSSKPI TTSSVSSSPF 540
  541 TEPRVVSAQK EPEKEKEKEK EKAAPIEKPK PQPEDSWSTK PRPAVMGTST VTPEKQPSQE 600
  601 TESKSKSSIV SSSTEKEADL SLLLHGFSRQ KVVDLVHWRD LKQSGLVFGS VLLLLFSLTQ 660
  661 FSVVSVIAYL ALAVLSATIS FRVYKSVLQA VQKTDEGHPF KSYLEVEISL SADQISKYVD 720
  721 KTQLYINTTM KELRRLFLVQ DLVDSIKFAV LMWLLTYVGA LFNGLTLLIL AVISMFSVPV 780
  781 VYEKYQTQID QYLGLVRTQV NSVMGKIREK VPGAKKKE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle