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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|72384422
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.95
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALTLTVLIL ACLLSLVSPD AQGDALFALR MSLRALPNQL SDWNQNQVNP CTWSQVICDD  60
   61 KNFVTSLTLS DMNFSGTLSS RIGILGTLKT LTLKGNGIAG GIPEEFGNLT SLTSLDLEDN 120
  121 ELSGFIPSTL GNLKKLQFLT LSRNNLNGTI PVSLTGLPNL INLLLDSNRL SGQIPQTLFE 180
  181 IPKYNFTGNN LNCGVGQPHP CVSEVARSGD SSKPKTGIIA GVVAGVTVIL FGILVFLFCR 240
  241 DRHKGYKRDV FVDVAGEVDR RIAFGQLKRF AWRELQLATD NFSEKNVLGQ GGFGKVYKGV 300
  301 LPDNTKVAVK RLTDFESPGG DAAFQREVEM ISVAVHKNLL RLIGFCTTQT ERLLVYPFMQ 360
  361 NLSLAHRLRE IKAGDPVLDW ETRKRIALGA ARGFEYLHEH CNPKIIHRDV KAANVLLDED 420
  421 FEAVVGDFGL AKLVDVRRTN VTTQVRGTMG HIAPEYLSTG KSSERTDVFG YGIMLLELVT 480
  481 GQRAIDFSRL EEEDDVLLLD HVKKLEREKR LGAIVDKNLD GDYVKEEVEM MIQVALLCTQ 540
  541 GSPEDRPVMS EVVRMLEGEG LAERWEEWQN VEVTRRHEFE RMQRRFDWGE DSMNNQDAIE 600
  601 LSGGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle