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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|72255629
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLYGSLHLS HGVGPCRNQG YYKPEDSAMS TRMGISKSPL SLGVPLGQHG FRNILLSDYL  60
   61 RRPISSVPCR ATAFRCHSFY AGGKVIEPPI RAATMVLTNS HRLIQQHPHV NKLVPAVAFL 120
  121 VFSLWGIVPL VRQGRNLLIN KKNDNGWKKS GTYRVMTSYV QPLLLWLGAL FICRALDPVV 180
  181 LPTEASKIVK DRLLNFVRSL STVLTFAYCI SSLIQQAQKL FSETSDPNDA RNMGFQFAGK 240
  241 AVYSAVWVAA VALFMELLGF STHKWLTAGG LGTVLITLAG REILTNFLSS IMIHATRPFV 300
  301 RNERIQIKIE GYEVSGTVEH VGWWSPTIVR GDHREAIHIP NHKFTVNVVR NITQKTHWRI 360
  361 KTHLAISYLD VNKINNIVAD MRKVLAKNPQ VEQQKLHRRI FLEDVNPENQ SLVILISCFV 420
  421 KTSHREEYLS VKEAILLDLL RVISHHRARL ATPIRTIRKM HTAADMENAP FGESMYGPGG 480
  481 VGSKRPSVVI EPSYKIYGED KSKSPKSASD TTNKVRDERG VKPGAKPVSK PATTAKDEAK 540
  541 VSGGAEKPKT KRSGSKTKSP KKDTTDGSTS SVSRSAMEEN LVLGVALEGS KRTLPIDEGE 600
  601 IQSSPKEADT KELTSAARRS GKGTLVADKE KEDGQSHTVA STEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle