YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74189451
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRLHDHVWN YPSAGAARPY SLPRGMIGAA ACPQGPGVPE PEHAPRGQRA GTTGCSARPG  60
   61 SWYHDLVQRS LVLFSFGVVL ALVLNLLQIQ RNVTLFPDEV IATIFSSAWW VPPCCGTAAA 120
  121 VVGLLYPCID SHLGEPHKFK REWASVMRCI AVFVGINHAS AKLDFANNVQ LSLTLAALSL 180
  181 GLWWTFDRSR SGLGLGITNA FLATLITQFL VYNGVYQYTS PDFLYIRSWL PCIFFSGGVT 240
  241 VGNIGRQLAM GVPEKPHSD

Type	Start	End	Confidence
Cytoplasmic	1	69	0.95
Transmembrane Helix	70	89	0.93
Non-Cytoplasmic	90	107	0.87
Transmembrane Helix	108	129	0.92
Cytoplasmic	130	143	0.88
Transmembrane Helix	144	161	0.91
Non-Cytoplasmic	162	168	0.74
Transmembrane Helix	169	186	0.93
Cytoplasmic	187	192	0.87
Transmembrane Helix	193	212	0.92
Non-Cytoplasmic	213	224	0.75
Transmembrane Helix	225	245	0.90
Cytoplasmic	246	259	0.88