YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ZNT10_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRYSGKTCR LLFMLVLTAA FFVAELVSGY LGNSIALLSD SFNMLSDLIS LCVGLGSGYI  60
   61 ARRGPRGSSA TYGYVRAEVV GALSNAVFLT ALCFTIFVEA VLRLARPERI DDPELVLIVG 120
  121 ALGLAVNVVG LLIFQDCGAC FSRCTRGRRT RPSQQPSQGD PRGALGCPQE AATATAPGSG 180
  181 TAVTLRGSSA GRKQQEGATV FSNVAGDSLN TENEPEETTK KEKKSEALNI RGVLLHVMGD 240
  241 ALGSVVVVIT AIIFYVQPLR REDPCNWQCY IDPSLTVVMV IIILSSAFPL IKETAVILLQ 300
  301 MVPKGVNMEE LMSQLSTVPG ISSVHEVHIW ELISGKIIAT LHIKHQKGTE YQDASRKIRE 360
  361 IFHHAGIHNV TIQFETLDLK EALEQKDFLL TCSAPCITQS CAKKLCCPPG TLPLALVNGC 420
  421 AEHNGRSSRE SYRSIEAPEV AIDVDGCPRE QGQTLSKTQE RQHYENSTHF

Type	Start	End	Confidence
Cytoplasmic	1	10	0.89
Transmembrane Helix	11	32	0.90
Non-Cytoplasmic	33	41	0.80
Transmembrane Helix	42	61	0.91
Cytoplasmic	62	78	0.85
Transmembrane Helix	79	101	0.87
Non-Cytoplasmic	102	115	0.87
Transmembrane Helix	116	139	0.88
Cytoplasmic	140	232	0.96
Transmembrane Helix	233	255	0.93
Non-Cytoplasmic	256	272	0.83
Transmembrane Helix	273	291	0.79
Cytoplasmic	292	470	0.81