YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94402670, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRLSVSGLD LGSVVTLSWH LLLLGAASWI LARILAWTYS FCENCSRLRC FPQPPKRNWF  60
   61 LGHLGMIEHN EEGMQLMTEA GQTYRDVHLC WLGPVIPVLR IVDPAFVAPL LLASALVAPK 120
  121 DTTFHTFVKP WLGDGLFLNS GDKWSRHRRL LTPAFHFDIL KPYVKIFNQS VNIMHAKWKH 180
  181 LSSEGSARLE MFEHISLMTL DSLQKCLFGF DSNCQESPSE YISAILELSS LVIKRSHQLF 240
  241 LFVDFLYYHT ADGRRFRKAC DLVHNFTDAV IRERRHTLSS QNHDEFLKSK TKSKTLDFID 300
  301 VLLLAKDEHG KELSDEDIRA EADTFMFGGH DTTASALSWI LYNLARHPEY QERCRQEVQE 360
  361 LLRGREPQEI EWDDLAQLPF LTMCIKESLR LHPPVIDLLR RCTRDIVLPD GRVIPKGNIC 420
  421 VISIFGIHHN PSVWPDPEVY DPFRFDPENA HKRPPLAFIP FSAGPRNCIG QTFAMNEMMV 480
  481 ALALTLLRFR ILPDDKEPRR KPEIILRAEG GLWLRVEPLS TVLKDSKPDL EASLPHPPIV 540
  541 LSGSQN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle