YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74184363
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RVVVTKGAVL GRPTLSVQQT PEGSLLARWE PPADAAEDPV LGYRLQFGRE DAAPATLELA  60
   61 AWERRFAAPA HKGATYVFRL AARGRAGLGE EAAAALSIPE DAPRGFPQIL GAAGNVSAGS 120
  121 VLLRWLPPVP AERNGAIIKY TVSVREAGAP GPATETELAA AAQPGAETAL TLRGLRPETA 180
  181 YELRVRAHTR RGPGPFSPPL RYRLARDPVS PKNFKVKMIM KTSVLLSWEF PDNYNSPTPY 240
  241 KIQYNGLTLD VDGRTTKKLI THLKPHTFYN FVLTNRGSSL GGLQQTVTAR TAFNMLSGKP 300
  301 SVAPKPDNDG FIVVYLPDGQ SPVTVQNYFI VMVPLRKSRG GQFPVLLGSP EDMDLEELIQ 360
  361 DISRLQRRSL RHSRQLEVPR PYIAARFSIL PAVFHPGNQK QYGGFDNRGL EPGHRYVLFV 420
  421 LAVLQKNEPT FAASPFSDPF QLDNPDPQPI VDGEEGLIWV IGPVLAVVFI ICIVIAILLY 480
  481 KNKPDSKRKD SEPRTKCLLN NADLAPHHPK DPVEMRRINF QTPGMLSHPP IPITDMAEHM 540
  541 ERLKANDSLK LSQEYESIDP GQQFTWEHSN LEANKPKNRY ANVIAYDHSR VILQPLEGIM 600
  601 GSDYINANYV DGYRRQNAYI ATQGPLPETF GDFWRMVWEQ RSATVVMMTR LEEKSRIKCD 660
  661 QYWPNRGTET YGFIQVTLLD TMELATFCVR TFSLHKNGSS EKREVRHFQF TAWPDHGVPE 720
  721 YPTPFLAFLR RVKTCNPPDA GPIVVHCSAG VGRTGCFIVI DAMLERIKTE KTVDVYGHVT 780
  781 LMRSQRNYMV QTEDQYGFIH EALLEAVGCG NTEVPARSLY TYIQKLAQVE PGEHVTGMEL 840
  841 EFKRLASSKA HTSRFITASL PCNKFKNRLV NILPYESSRV CLQPIRGVEG SDYINASFID 900
  901 GYRQQKAYIA TQGPLAETTE DFWRALWENN STIVVMLTKL REMGREKCHQ YWPAERSARY 960
  961 QYFVVDPMAE YNMPQYILRE FKVTDARDGQ SRTVRQFQFT DWPEQGAPKS GEGFIDFIGQ1020
 1021 VHKTKEQFGQ DGPISVHCSA GVGRTGVFIT LSIVLERMRY EGVVDIFQTV KVLRTQRPAM1080
 1081 VQTEDEYQFC FQAALEYLGS FDHYAT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle