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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74150483
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HGRRLGAVPL PYGAGAWARA LSGSSVWRRL RAGSSAVFLL ALTITASVQA LTPTHYLTKQ  60
   61 DVERLKASLD RPFTDLESAF YSIVGLSSLG VQVPDVKKAC TFIKSNLDPS NVDSLFYAAQ 120
  121 SSQVLSGCEI SVSNETKELL LAAVSEDSPI AQIYHAVAAL SGFGLPLASN EALGALTARL 180
  181 GKEETVLATV QALQTASHLS QQADLRNIVE EIEDLVARLD ELGGVYLQFE EGLELTALFV 240
  241 AATYKLMDHV GTEPSMKEDQ VIQLMNTIFS KKNFESLSEA FSVASAAAAL SQNRYHVPVV 300
  301 VVPEGSTSDT QEQAILRLQV SNVLSQPLAQ AAVKLEHAKS AATRATVLQK TPFSLVGNVF 360
  361 ELNFKNVKLS SGYYDFSVRV EGDSRYIANT VELRVKISTE VGITNVDLST VDKDQSIAPK 420
  421 TTRVTYPAKA KGTFIADSHQ NFALFFQLVD VNTGAELTPH QTFVRLHNQK TGQEVVFVAE 480
  481 PDNKNVYKFE LDTSERKIEF DSASGTYTLY LIIGDATLKN PILWNVADVV IKFPEEEAPS 540
  541 TVLSQSLFTP KQEIQHLFRE PEKRPPTVVS NTFTALILSP LLLLFALWIR IGANVSNFTF 600
  601 APSTVIFHLG HAAMLGLMYI YWTQLNMFQT LKYLAVLGTV TFLAGNRMLA QHAVKRTAH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle