YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74194192, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVSGLLFCQ GCAPWQGVLL TASFLTCWYL STTSKVTIEL LPSQVVEGED VLFLVNNLPG  60
   61 NLTAFAWFKG RTNRKHGIAL YAVASDLYVH SDRETLYNNG SLMIHNVTQK DRGYYTLRTF 120
  121 NKHAETVSTT FTFLHVNPFL WNCGRLVTSS QPRIESFPSI VTEGQHVILH VYNIPENLQG 180
  181 FIWFKGMTVH RHLEIGRYTI GRKSSVFGPA YSGREKLDSN GSLRIENVTQ KDAGLYTLRV 240
  241 LGTDMKSEEA HVELQVNNPA FQCCNPSTSS KLMVEAVPRY VAEGESVLLL VHNLPEELIS 300
  301 FTWYNSMYRV PAFKIVEFNV IRNITTWGDV YRGRDTVYAN GSLMLQDVTE EDARMYTLET 360
  361 LNVNYTVERA HVQFYVNKPV TQPFVQITDT TANAQRSLTF TCVTPDIATS ILWFFNSHSL 420
  421 KPTERITLSP TKCGLRIDDV RSEDAGNYQC VVVNRNGDAK ASHPIRWP

Type	Start	End	Confidence
Signal Peptide	1	22	0.63
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	468	0.98