YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74178221
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEYAREPCP WRIVDDCGGA FTMGVIGGGV FQAIKGFRNA PVGIRHRFRG SVNAVRIRAP  60
   61 QIGGSFAVWG GLFSTIDCGL VRLRGKEDPW NSISSGALTG AVLAARSGPL AMVGSAMMGG 120
  121 ILLALIESVG ILLTRYTAQQ FRNAPPFLED PSQLTPKEGS PAPGYPNYQQ YH

Type	Start	End	Confidence
Cytoplasmic	1	16	0.56
Transmembrane Helix	17	34	0.75
Non-Cytoplasmic	35	56	0.47
Transmembrane Helix	57	81	0.69
Cytoplasmic	82	89	0.48
Transmembrane Helix	90	108	0.48
Non-Cytoplasmic	109	109	0.45
Transmembrane Helix	110	134	0.79
Cytoplasmic	135	172	0.79