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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74196566
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSASSQPAAH YSGAEKQIWW TGRPIPWVKG APPLDNPPCA FDLDDPSCDK TPLSTLAIVA  60
   61 LGTGVTFIMF GVSSFLIFRK LMLEKELASM LWRIRWEELQ FGNSDRYHKG AGSRLTLSLR 120
  121 GSSYGSLMTA HGKYQIFANT GHFKGNVVAI KHVNKKRIEL TRQVLFELKH MRDVQFNHLT 180
  181 RFIGACIDPP NICIVTEYCP RGSLQDILEN DNINLDWMFR YSLINDLVKG MAFLHNSIIS 240
  241 SHGSLKSSNC VVDSRFVLKI TDYGLASFRS TAEPDDSHAL YAKKLWTAPE LLSGNPLPTT 300
  301 GMQKADVYSF AIILQEIALR SGPFYLEGLD LSPKEIVQKV RNGQRPYFRP SIDRTQLNEE 360
  361 LVLLMERCWA QDPTERPDFG QIKGFIRRFN KEGGTSILDN LLLRMEQYAN NLEKLVEERT 420
  421 QAYLEEKRKA EALLYQILPH SVAEQLKRGE TVQAEAFDSV TIYFSDIVGF TALSAESTPM 480
  481 QVVTLLNDLY TCFDAIIDNF DVYKVETIGD AYMVVSGLPG RNGQRHAPEI ARMALALLDA 540
  541 VSSFRIRHRP HDQLRLRIGV HTGPVCAGVV GLKMPRYCLF GDTVNTASRM ESNGQALKIH 600
  601 VSSTTKDALD ELGCFQLELR GDVEMKGKGK MRTYWLLGEQ KGPPGLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle