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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74149538
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFKDSDCRC RLIGHRQRSY CSPQACSCSQ RYSLTQKGMA RPRHLRGLGM CITAVLASFI  60
   61 AGFNGGWFIK PLKETTTSAG YHQSIQQKLL SEMKAENIRS FLRSFTKLPH LAGTEQNLLL 120
  121 AKKIQTQWKK FGLDSANLVH YDVLLSYPNE TNANYVSIVD EHGVEIFKTS YLEPPPDGYE 180
  181 NVTNIIPPYN AFSASGMPEG ELVYVNYART EDFFKLEREM NINCTGKIVI ARYGKIFKGN 240
  241 KVKNAMLAGA MGIILYSDPA DYFAPDVQPY PKGWNLPGAA AQRGNVLNLN GAGDPLTPGY 300
  301 PAKEYTFRLP VEEAVGIPNI PVHPMGYNDA ERLLRNLGGA APPDKSWKGS LNVSYNIGPG 360
  361 FTGSEYSRNI RMHVNNINKI TRIYNVIGTI RGSTEPDRYV ILGGHRDSWV FGGIDPTTGT 420
  421 AVLQEIARSF GKLVNGGWRP RRTIIFASWD AEEFGLLGST EWAEENAKLL QERSIAYINS 480
  481 DSAIEGNYTL RVDCTPLLNQ LVYKVAREIS SPDDGFESKS LYESWLEKDP SPENKECPRI 540
  541 NKLGSGSDFE AYFQRLGIAS GRARYTKNKK TDKYSSYPVY HTIYETFELV QNFYDPTFKK 600
  601 QLSVAQLRGA LVYELADSVV IPFNIQDYAK ALKNYAASIF NISKKHDQQL RNHAVSFDPL 660
  661 FSAVKNFSEA ASDFHRRLTQ VDLNNPIAVR IMNDQQMLLE RAFIDPLGLP GRKFYRHIIF 720
  721 APSSHNKYAG ESFPGIYDAM FDIENKADPS LAWAEVKKHI SIAAFTIQAA AGTLTNVL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle