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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|72123354, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTKSATPSV EELGVAGGQH MTGQVETARQ QRVRDPVCGM EISPGEAAAS AEVDQRRYWF  60
   61 CSSHCEKTFL ANPAQYIPHP SHEHARVGAS TPTTAAATPA ASGAKQLAKD PICGMMVDKA 120
  121 TALSTERGNR KYYFCSESCL RTFESPESEL KAMKTRVTIA LTGVLALAVL RAGAFLALAA 180
  181 GATLLTWAPI PALPWFTWGM WLFLLVTPVQ FIGGWSFYKG AWNAVRTRNI NMDFLIALGT 240
  241 SVAYFYSVVV LFFPSWLPVK VEERDVYFEV SAVIIAFVLL GKYMEEIIKK KSSAAVRRLL 300
  301 DLRPAVAHVI RDGKEVEIPA ESIMVGESVI VRPGEKIPTD GKVIEGESSV DESMLTGESM 360
  361 PVEKKPGTAV IGGTLNRSGA FTFQATKIGA DTALAQIIKM VEDAQASTAQ IQRLADQVTG 420
  421 YFVPAVVSVA LLALVGWSVA GHFPHGLLAF VAVLIISCPC ALGVATPAAL MVGVGKGADN 480
  481 GILIRGGEVL ERAEKLTAVV FDKTGTITRG EPTVTDVISF SNNEESTLLT LAAAVESGSE 540
  541 HPLGEAVVRA AQHRGVAIPK ASGISALSGM GIQGLVDGQQ VWLGNRRLFA KQGIATKEAE 600
  601 AVLGKLEADG KTGMLVGAGT SLLGVVAVAD TVKPEAADAV TALKSRNVKV VLLSGDNHRT 660
  661 AEAIGRQVGI DRVIAEVMPE DKVQTIQDLQ RQGEVVAMVG DGVNDAPALA AADIGIAIGS 720
  721 GSDVAKETGS IILIRDDVRD VVASIQLSRA TMRKIKQNLF WAFIYNSIGI PVAAFGLLNP 780
  781 IFAAAAMALS SLSVVANSAL LKRVRLGQAS TEVT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle