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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73539423, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYMRNNQPV TQNEYKLSPD DYLISRTDLK GRITFANRTF VEASGFSAQE LLGAAHNLVR  60
   61 HPDMPPEAFA DLWQNIQAGR SWVGVVKNRR KNGDYYWVSA TVTPTHIDGR LVGYTSVRSM 120
  121 ATREQVEAAS AAYARFREGR AGGLAIREGA VVRTGMAGWV GRATRLNLRR RILWSQAGGL 180
  181 VWFLAALLAA EAFGGDAVAA VRPWLWGGFV LAVVTAFATG TMLLSRVHRP VREMLDFALR 240
  241 MGAGDLTTSF EHRANDEVGA LAQAMQTMQR SLLSVVHEIQ EGMASISSAT HQVAAGNNDL 300
  301 SQRTEQQAAS LEETASSMEE LTSTVRQNAD NARQASGLAA NASETAVRGG EVVGRVVNTM 360
  361 EEINEASRKI VDIIGVIEGI AFQTNILALN AAVEAARAGE QGRGFAVVAG EVRSLAQRSA 420
  421 NAAKEIKGLI GDTVARVDNG TALVGQAGTT MDEIVQAVKR VTDIMSEISA ASAEQSSGIE 480
  481 QVNQAVAQMD EVTQQNAALV EQAAAAAGSL EEQAERLRDA VATFRVSMQA EVRPQRPRRA 540
  541 DTEGVLSLAQ A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle