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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: IF2_CUPPJ
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTTVAQLA AELSRSAAAL LEQLQAAGLG KATPEDIVTE SDKTRLLDYL KRSHGQADDS  60
   61 ARKKITLTKR ETSEIRQADS TGKTRTVQVE VRKKRVLIKR DEAGADQHNE AADQHALAAE 120
  121 AAEQARREEE ERQQAAELAR QEAEAKARRE AAEREEAERR AKQEALEAEQ RRQAELLARK 180
  181 AEEEAAAARA VGEAAEDASR KKAEDEQARV AVERAAAQKA ADDAKAAADK ARAEQDAARK 240
  241 RREAAEAEAR AIQQMLNAPA RVLKAPSERK AEEKKAEQTG TLHKPVKPAS ATATEAKAGD 300
  301 KKPAATTTTT TATTTADKKG KTGKPGSWQD DSSRKKGSGL KTRGDSSGGV GGWRGGPRGR 360
  361 GGRQQHADDG RSNFQAPTEP VVREVHVPET ISVADLAHKM AVKASEVIKQ MMKLGQMVTI 420
  421 NQVLDQETAM IVVEEMGHKA FAAKLDDPEA LLVVDGEEHT DAEQLPRPPV VTVMGHVDHG 480
  481 KTSLLDYIRR AKVAAGEAGG ITQHIGAYHV ETERGVITFL DTPGHEAFTA MRARGAKATD 540
  541 IVILVVAADD GVMPQTKEAI AHAKAAGVPI VVAINKIDKP DANPDRVKQE LVAEQVLPEE 600
  601 YGGDSPFVPV SAKTGAGIED LLEQVLLQAE VLELKAPVDA PAKGLVVEAQ LDKGKGPIAT 660
  661 ILVSSGTLKR GDVVLAGSAY GRVRAMLDEN GKPTKEAGPS IPVEIQGLSE VPAAGEEVLV 720
  721 LPDERKAREI ALFRQGKFRD VKLAKQQAAK LETMLEQMTE GDVQTLPLIV KADVQGSQEA 780
  781 LVQSLQKLST AEVRVQIVHA GVGAISESDV NLATASKAVI IGFNVRADAG ARKLAENHGI 840
  841 DIRYYNIIYD AVDEIKAAMS GMLAPEKRET TIGQVEVRQV FRVPKIGAVA GCMVTDGLVK 900
  901 RNSLVRVLRN NVVVHTGELD SLKRFKDDVK EVKQGFECGL SIKNFNDVQE GDQLEVYEIT 960
  961 EVARTL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle