YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73540552, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRVRASPSA GFGIPLYTLC KRSPLAAMGA LSHLRVLDLT RVLAGPWCAQ NLADFGADVI  60
   61 KIERPGAGDD TRTWGPPWLK ATDGSDTAEA AYYLAANRNK RSVTCDISSP EGQQLVRELA 120
  121 AQSDVVLENY KVGQLKKYGL DYASLKAVKP DIIYCSVTGF GQSGPYAARP GYDFIIQGMG 180
  181 GFMSLTGERD DLPGGGPQKA GVAISDLMTG QYATIAVLAA LAHRDRTGEG QYIDMALLDV 240
  241 QVAMLANMNT NYLASGQAPR RWGNAHPNIV PYQTFQAADG WLIVAVGNDG QFRKFVNDGG 300
  301 QPELADDPRF STNPLRVANR DVLVPILADM VRTRTRAQWI RDLEAAGVPC GPINSLDEVF 360
  361 EDEQVKARGL RVDLPHPSAG EVKLVGSPIK MSATPPEALR HPPLLGEHTD TILAESLGYS 420
  421 PEKIAALRAK GVV

Type	Start	End	Confidence
Signal Peptide	1	29	0.57
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	433	0.99