YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73540400, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYLLGLSRQ IDRLNQHTGR LANIMILLSC LISAGNALLR YGFNLSDNWP LELQWYMFAI  60
   61 AVMFGASYTF QRNEHVRVDL FYGNVSERAQ HWIDIFGIVV FLLPSCILFT WLSWDSLFLP 120
  121 SWRILEQSGN SGGLPRYPIK LVVPVGFALL ALQGVSELIK RFAALKGLVR IESKYERPVQ 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	20	0.95
Transmembrane Helix	21	41	0.94
Non-Cytoplasmic	42	52	0.85
Transmembrane Helix	53	71	0.95
Cytoplasmic	72	91	0.94
Transmembrane Helix	92	112	0.98
Non-Cytoplasmic	113	136	0.93
Transmembrane Helix	137	156	0.83
Cytoplasmic	157	180	0.83