YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73540163, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFAKLASLM MAAGLFCGSA QAAEQLTGTL KKIKDTGVIT LGVRDSSIPF NYNLGGVRQV  60
   61 GYSYDINMKI VEAIKDQLKM PNLQVKEIPI TSQNRITLLQ NGTIDIECGS TTNNLERQKQ 120
  121 VSFTDSIFII GTRIMVKKDG GIKDWADLKG KNVVTTAGTT SERLLRKMND DQKLGMNIIS 180
  181 TKDHGQSFLT LESGRAVAFM MDDALLYGER AKAKNPADWI VVGKPQSREA YGCMIRKDDP 240
  241 QFKKVSDTVI AGMMKDGSIN TLYTKWFMQP VPPKGLNLDF PLSEDMKALI KNPNDKALD

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	299	0.99