YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74200991
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLPWELLVL QSFMLCLADD YTLHGPVFVQ EPSHVMFPLD SEEKKVKLSC EVKGNPKPHI  60
   61 RWKINGTDVD IGMDFRYSVV DGSLLINNPN KTQDAGTYQC IATNSFGTIV SREAKLQFAY 120
  121 LENFKTRTRS TVSVRRGQGM VLLCGPPPHS GELSYAWIFN EYPSYQDNRR FVSQETGNLY 180
  181 IAKVEKSDVG NYTCVVTNTV TNHKVLGPPT PLILRNDGVM GEYEPKIEVQ FPETVPAEKG 240
  241 TTVKLECFAL GNPVPTILWR RADGKPIARK ARRHKSNGIL EIPNFQQEDA GSYECVAENS 300
  301 RGKNVAKGQL TFYAQPNWVQ IINDIHVAME ESVFWECKAN GRPKPTYRWL KNGDPLLTRD 360
  361 RIQIEQGTLN ITIVNLSDAG MYQCVAENKH GVIFSSAELS VIGESLKWKE

Type	Start	End	Confidence
Signal Peptide	1	18	0.93
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	410	0.99