YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PYRF_EHRCR
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTNPIICAL DTHDINHALL LTKMLYGRVS MVKLGLEFFT AYGLSGVQAI ADCGVPIFLD  60
   61 LKLHDIPNTV SKAISVIASL NVAMLTIHVS GGREMMIRAM DSISGSVTKL VGVTVLTSMD 120
  121 DSDLKEIGVN ESPVQQVMLL SKLAREVGLY GIVCSAFEAK EVRNRYTEKD LKLIVPGIRF 180
  181 DSDCNDQKRV KSPKDAMLAG ANYLVIGRPI TMSSDPVQTV EDILLSISKC I

Type	Start	End	Confidence
Cytoplasmic	1	33	0.72
Transmembrane Helix	34	51	0.66
Non-Cytoplasmic	52	69	0.75
Transmembrane Helix	70	91	0.71
Cytoplasmic	92	231	0.75