YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88658472, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTMQKIFIS SDHAGIELRL VIKLYLSNLG YVVEDYGCME SSIAVDYPDY VQNVVDCVIN  60
   61 TLGFGILICG TGIGMSIVAN RHRKIRAALC YNVEVAKLAR EHNNANVLCL GARYINHGEA 120
  121 QSIVYQFITT KFSEGRHVQR IAKIDNCL

Type	Start	End	Confidence
Non-Cytoplasmic	1	57	0.75
Transmembrane Helix	58	79	0.83
Cytoplasmic	80	148	0.86