YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88658456, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSHSVYHWL IQRVTAFVLI PLSLWFLFKV LGVISIILKS FPELHLSISN ISNTDLIILL  60
   61 CFFISAFYHA VLGVQVILED YIHSVVLRAS VFLVIKGIVI LTVLFLTFII LYSVLLGY

Type	Start	End	Confidence
Cytoplasmic	1	13	0.64
Transmembrane Helix	14	38	0.83
Non-Cytoplasmic	39	55	0.63
Transmembrane Helix	56	78	0.86
Cytoplasmic	79	91	0.63
Transmembrane Helix	92	115	0.90
Non-Cytoplasmic	116	118	0.63