YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88658416, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTNKNIADV AVIMGSQSDF STMNNSISIL KELNITHEVM IISAHRTPER LYTFAKSAED  60
   61 NGFKVIIAGA GGAAHLPGLV ASLTHIPVIG VPVKSSNLNG IDSLLSIVQM PKGIPVATMS 120
  121 IGSSGGYNAA IMAASILSLE NDEIRKNLKI WRKNLSDSVK LIPDIPL

Type	Start	End	Confidence
Cytoplasmic	1	64	0.73
Transmembrane Helix	65	86	0.64
Non-Cytoplasmic	87	115	0.85
Transmembrane Helix	116	139	0.61
Cytoplasmic	140	167	0.66