YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88599818, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRCTFYYKL QMKNVAIIFV LILFSSTVCF AKQEVRSIAQ DNHIKVITYN PHAVHKYTGF  60
   61 YGYQSSIVFD DGEDIDTISM GDSTGWQLMP KGNRLFIKPV ADKADTNATI ITNKRVYYFE 120
  121 FFAEEAQGLD DPRLAYEVRF VYSSTEDFIS EDSPGMVFPV NQPAIPDLTD SDVAKKGLNF 180
  181 DYLVSHNRGS QRIVPLKIFD DNQFTYMQFA QINADLPSIF TVDSEGYESL INFRVSGDYV 240
  241 IIERVSSAFT LRYGSDTVCV FNNKYKKTKR

Type	Start	End	Confidence
Signal Peptide	1	31	0.98
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	270	0.99