YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GPDA_EHRCR
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTTILGAGS FGTAIAFALS SNSTSVNLWG RNHTDMQSIA INRKNLKYLP TCKLPENIIV  60
   61 SSNIDEVLSD YSTCIILAVP TQQLRTLCLS IQDKQHIFEK TPLLICSKGI ENISLKFPSE 120
  121 IVKEILPNNP AFILSGPSFA KEIAEDLPCT IVLAGENESL GTSIAQKISN KTFKIIYSQD 180
  181 ILGVQIGAAL KNIIAIACGI VTGKNLGNNA IATVITKGME EIKTLYAAKN QNINLSTLIG 240
  241 PSCLGDLILT CTTAHSRNMS FGITIGQGAD INKMLNNNSK IIEGVSTVKP LISLAKELNI 300
  301 ELPICTSIYN LLYKNIPLEK TISDIL

Type	Start	End	Confidence
Signal Peptide	1	23	0.90
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	326	0.99