YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88658164, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKSFKFILG FLTIATVIVS LNSMFIVDEA HQSIVLQFGR VVKQIHNSGL YFKVPFIQKV  60
   61 VYVDKRIIDI SSDSREVIAA DQKRFIVDSY AKYKIVDAVK FYQTVRNETG LKNRLSSIIE 120
  121 SNIREKIGNV SLINFLNEAR SEVMSVIQEG VSKESQKFGI EMIDVRIKRA DLPEENSIAI 180
  181 FRRMQTDREK EAKEIRAEGE AASQRIKADA DLQTRIIIAN AIKEAQIIRG NGDAKASKIY 240
  241 NEALKSDPNF FSFYRTMQAY KHAFNGKNTR IILSPNNDFI NLFNKERGK

Type	Start	End	Confidence
Signal Peptide	1	23	0.57
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	289	0.98