YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88599609, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQMFNIAEY VPVLIFLAVS GFISFLFCIL PMLLANRSPD LEKLSPYECG FAPLGNSRKI  60
   61 FDIRFYLVAI LFIIFDLEIA FLFPWSICLS DIGINGFWSM MVFLAILTVG FIYEWSKGAL 120
  121 EWE

Type	Start	End	Confidence
Non-Cytoplasmic	1	12	0.78
Transmembrane Helix	13	34	0.93
Cytoplasmic	35	64	0.84
Transmembrane Helix	65	85	0.93
Non-Cytoplasmic	86	93	0.68
Transmembrane Helix	94	115	0.90
Cytoplasmic	116	123	0.84