YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88658123, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLYTIVATW FGCGNITRAP GTIASFATML LSPAIILNNL FGILIIVLTG IMGLFAIPKY  60
   61 LLDHPNIVDP KEIVIDEVIG QLIAFSIPIV FFRYYQYVPQ TFNTLYLLFY IKILITSFIL 120
  121 FRIFDITKIW PINILERISG TTGIILDDVL AGIMSSICTI FIIAKIGT

Type	Start	End	Confidence
Cytoplasmic	1	9	0.70
Transmembrane Helix	10	31	0.65
Non-Cytoplasmic	32	34	0.39
Transmembrane Helix	35	62	0.79
Cytoplasmic	63	72	0.72
Transmembrane Helix	73	95	0.76
Non-Cytoplasmic	96	103	0.69
Transmembrane Helix	104	124	0.91
Cytoplasmic	125	143	0.74
Transmembrane Helix	144	164	0.93
Non-Cytoplasmic	165	168	0.61