YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88658045, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNDEDKYSV FKTKVKRRDF LGLTTLSMAG IGLFSSVYPL IKFLSPSAEV IAQSTVEVNL  60
   61 SDIKEGKTKV IKWQGKPVFI RKRTTQEIEE ARAVKIDSLR DPQSDQERTH QGREEWLIMV 120
  121 GICTHLGCVP VEVDDGKKGW YCPCHGSKYD TSGRIISGPA PLNLPVPDYY FSQKDVIVIG 180
  181 VKGTDVA

Type	Start	End	Confidence
Cytoplasmic	1	19	0.95
Transmembrane Helix	20	41	0.91
Non-Cytoplasmic	42	187	0.99