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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88658009, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKVSKSIIY VLMLFLINVN FICAKSTLAA EVESEKVAVY RTTIASNPLY AKVSEHAKYI  60
   61 GIAGFTAGFA LIIGSIFFLN PATWYVALGM FLAGMAAIAF AAAKAAPFFA CNWSFVRHPI 120
  121 MRFDTHDAKR NGNTEGSYKE CEEPTKNYPD CTNRDFGSEE EYFRCLVTGD KDSTKPVSIN 180
  181 NAKQNEPVCA SQKFKKVDKY YWPKNRISSS NYIEVCYRNP IGSLNPITMI KRASEASSGN 240
  241 VTELLKKGEY PREGDYSTQE IKVAKYAMQG EVKCEVLQAG QEKVIHTITF QAVEKADKLC 300
  301 VYATKSIGIP LWPQVEIGCH MRPSGPPVPM CEKSTPVMSD DNKRIVSYDN SKCYSCYIDP 360
  361 ACRGEVGPHI KSVFPMTSII VSCIKGSLSN ILTGQCGQNA SKKVGFLKVA QDKLKKAVMA 420
  421 VLVLALILFA IKAALGGIQS PAELYMLIIK FALVVYFTQG SAMSHYYDQI VKLSIGLSDM 480
  481 VLQAGGSQTI CDYSQSDYED KYKYIAPWDR LDCRVLFYLG QQVNGGAATI VLGVLLSAGL 540
  541 FFATMLFNMK LMLCLIAIFA VIMLLLIMIW LVYIFLLSLI ALTILILISP LMIPMVLFQA 600
  601 TKGFFDGWIR QLMVYTLYPV ILFAFLALLF TVFDNLYFED LKFKRKEVNV LGQKRITFTL 660
  661 NDPRECDDPK YDNNLACMFG NIEFITKPAF FGFNAYAPDF KHGAEMLWMK LLMMVLIGFL 720
  721 FYHFLSSIAY IAAELAGDPR AGHVGSSFTP KSMLASIVGL AAKVQGSVGE QAKKAITDKL 780
  781 DDRKKSASDG GGKDELSGGS SEGAGDAAEG AGGGAGGSGA ASGGGG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle