YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88657866, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRHIILLLL YCFISIQVHI SNAVALPIQT TAPQAAVFDF FSNTMLLEHN IDEQIAPSSM  60
   61 TNLMTLYVTF YYIKAGFVKM EDKFKTSKEA WQKGGNSIFL RAGQLVAVRD LINGIITTSA 120
  121 NDACITLAEG VAGSQENFVD EMNRIAQKLN LTKSHFSNVI GAQDKNQFMS IRDLITLTVR 180
  181 IFEDFPEYYH LFSKKDFKYN NIYQENINLL SPDNRIDGII SIYTDAGGYG SIVAAKHEGR 240
  241 RIFILISGLK TEKERISEIK QLLDYAFNDF SSQTIFHKGS KAKEIIVKNG DAKYVEAVFN 300
  301 NDVIILYPKG SYDTVKTFFS HENAISAPVK KGQEVGHLHI QVPELTERVI PMYAANDINH 360
  361 LNFFQRILYM FSPKTDKVAT S

Type	Start	End	Confidence
Signal Peptide	1	23	0.95
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	381	0.99