YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88657850, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDTQTNDDR YIGSNQYFQD ALNWYCGRYL LCITERAWLF VISLFLSSIL LILILDIFSY  60
   61 FPLKTNFSFT KYTDHYTDEF SVIKKLSTNN EDSEETLLSQ YLVAQYVKKY ESYLYNDLDS 120
  121 QFNFIKNNSS RKIYLAFKEM IASHHYIDNS KYNAISIETT IHNVKLLSKD FTSSNNAIVT 180
  181 FKKQIAINGV ISHVQSYKVL VTFSLSSIKM AISGIMPLEF LVHDYKKLD

Type	Start	End	Confidence
Cytoplasmic	1	36	0.95
Transmembrane Helix	37	60	0.91
Non-Cytoplasmic	61	229	0.95