YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PSD_EHRCR
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYNFIHNIH KEGYIFIMIS FLASCIGFAI SCSLGIICLV ISLLCIYFFR DPIRMVPEGD  60
   61 DLITSPADGL ILDIKEVNSP IDDSTQVVCI SIFLNVLNVH VNRIPVSGTI KATEYIPGRF 120
  121 ISASLNKSSE LNERQRLIIE SKIDNRSIIV DQIAGLIARR IVCNVSEGQQ VNSGERFGII 180
  181 RFGSRVNLYL PLNTHISVFK GQTVIGGETI LAYLQDAPKQ LTVKSI

Type	Start	End	Confidence
Non-Cytoplasmic	1	14	0.59
Transmembrane Helix	15	48	0.88
Cytoplasmic	49	226	0.61