YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88657713, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKFTLLIVA AGNSNRFKWS AIPKQYCSLG NHNILCSTIN NMISHPKINY VKVVIRKEHQ  60
   61 HLYDNCLQKI QNDKLLPPTY GGKRRQDSVR MGLESIQNIN PYFVIIHDAC RPFIDLKILD 120
  121 TMESILTHYA GVVPVLSITD TIHVVHENKT VIQNVDRNSI KLIQTPQAYK YSEILLHHRI 180
  181 AYNTEPNREF PDESSLMIHY NIPIMTTEGD YNNFKITTIE DLHRAILYTK HIDHNY

Type	Start	End	Confidence
Signal Peptide	1	16	0.61
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	236	0.99