YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MNMA_EHRCR
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNDFKIDPL VKNKSPSATT AVVAMSGGVD SSVAAALLHK LGYKVIGITL QLYNNTTGKG  60
   61 ACCGSLDTQD AKQVASIMGF PHYTLNYEKV FKEEVIDDFI DTYMQGKTPI PCIKCNQVVK 120
  121 FRDLLNATKS LDADILVTGH YIRKIEQDDD IYVYSSKDTK KDQSYFLFAT TIEQLKFLRF 180
  181 PLGNFHKDNI RKLAEHFNLP IANKPDSQNI CFVADTYKNT IAQLRPNAIK KGNIIDTSGN 240
  241 ILGQHDGIVN FTIGQRRGIG LSSKEPLYVI KLNPDTNEVT VGHKSALLQN KLHIEKINWL 300
  301 VKDKIPHTGL NVKVKLRSSH SGSTAIVYPN DNNKATVLLQ DTYCTVTPGQ ACVIYDGDRM 360
  361 LGGGWIC

Type	Start	End	Confidence
Signal Peptide	1	35	0.63
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	367	0.99