YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MDH_EHRCR
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKRKKIALI GAGSIGGMIA YLVRSRNLGD VVLLDVNGGI AKGKALDIAE SSPVAKHNGE  60
   61 ILGTNNYADI EGADAIIVTA GISRKPGMSR DDLINTNVHV IKEVAENIAK YAPNAFVVVV 120
  121 TNPLDIMVLA MHKYSHLPSN MVVGMAGVLD AARFSYFIAK ELNVSVDSVS SIVLGGHGDF 180
  181 MLPLVKYSSV GGISIADLVK MNLITQDRVN EIIEKTRKGG EEIVNLLKVG SAYYAPAESA 240
  241 LLMVDSYLND RRLMLSCSVY LKGEYGVHDL FVGVPVIIGK NGVEKVIELQ LTEEEKNVFN 300
  301 DSVMSIRKLV SNI

Type	Start	End	Confidence
Signal Peptide	1	22	0.69
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	313	0.98